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Publications

Science knows no country, because knowledge belongs to humanity, and is the torch which illuminates the world.

– Louis Pasteur

Kaiyi Jiang, Justin Lim, Samantha Sgrizzi, Michael Trinh, Alisan Kayabolen, Natalya Yutin, Eugene V. Koonin, Omar O. Abudayyeh, Jonathan S. Gootenberg

June 14, 2023

bioRxiv

Joung, J., Ma, S., Tay, T., Geiger-Schuller, K.R., Kirchgatterer, P.C., Verdine, V.K., Guo, B., Arias-Garcia, M.A., Allen, W.E., Singh, A., Kuksenko, O., Abudayyeh, O.O., Gootenberg, J.S., Fu, Z., Macrae, R.K., Buenrostro, J.D., Regev, A., and Zhang, F.

January 5, 2023

Cell

Yarnall, Matthew T. N., Ioannidi, Eleonora I., Schmitt-Ulms, Cian, Krajeski, Rohan N., Lim, Justin, Villiger, Lukas, Zhou, Wenyuan, Jiang, Kaiyi, Roberts, Nathaniel, Zhang, Liyang, Vakulskas, Christopher A., Walker, John A., Kadina, Anastasia P., Zepeda, Adrianna E., Holden, Kevin, Abudayyeh, Omar O., Gootenberg, Jonathan S.

November 24, 2022

Nature Biotechnology

Patchsung, Maturada, Homchan, Aimorn, Aphicho, Kanokpol, Suraritdechachai, Surased, Wanitchanon, Thanyapat, Pattama, Archiraya, Sappakhaw, Khomkrit, Meesawat, Piyachat, Wongsatit, Thanakrit, Athipanyasilp, Artittaya, Jantarug, Krittapas, Athipanyasilp, Niracha, Buahom, Juthamas, Visanpattanasin, Supapat, Niljianskul, Nootaree, Chaiyen, Pimchai, Tinikul, Ruchanok, Wichukchinda, Nuanjun, Mahasirimongkol, Surakameth, Sirijatuphat, Rujipas, Angkasekwinai, Nasikarn, Crone, Michael A, Freemont, Paul S, Joung, Julia, Ladha, Alim, Abudayyeh, Omar, Gootenberg, Jonathan, Zhang, Feng, Chewapreecha, Claire, Chanarat, Sittinan, Horthongkham, Navin, Pakotiprapha, Danaya, Uttamapinant, Chayasith.

November 11, 2022

The CRISPR Journal

Kato, K., Okazaki, S., Schmitt-Ulms, C., Jiang, K., Zhou, W., Ishikawa, J., Isayama, Y., Adachi, S., Nishizawa, T., Makarova, K.S., Koonin, E.V., Abudayyeh, O.O.#, Gootenberg, J.S.#, Nishamasu, H.

November 3, 2022

Science

Strecker J., Demircioglu, F.E., Li, D., Faure, G., Wilkinson, M.E., Gootenberg, J.S., Abudayyeh, O., Nishimasu, H., Macrae, R.K., and Zhang, F.

November 3, 2022

Science

Jiang K,Koob J,Chen XD,Krajeski RN,Zhang Y,Villiger L,Zhou W, Gootenberg JS, Chen F, Abudayyeh OO

October 27, 2022

Nature Biotechnology

Kato, K., Zhou, W., Okazaki, S., Isayama, Y., Nishizawa, T., Gootenberg, J.S.#, Abudayyeh, O.O.#, Nishamasu, H.

June 23, 2022

Cell

Yarnall, Matthew T. N., Ioannidi, Eleonora I., Schmitt-Ulms, Cian, Krajeski, Rohan N., Lim, Justin, Villiger, Lukas, Zhou, Wenyuan, Jiang, Kaiyi, Roberts, Nathaniel, Zhang, Liyang, Vakulskas, Christopher A., Walker, John A., Kadina, Anastasia P., Zepeda, Adrianna E., Holden, Kevin, Abudayyeh, Omar O., Gootenberg, Jonathan S

November 1, 2021

bioRxiv

Ozcan A,Krajeski R,Ioannidi E,Lee B,Gardner A,Makarova KS,Koonin EV,Abudayyeh OO,Gootenberg JS

September 6, 2021

Nature

Kaminski MM,Abudayyeh OO,Gootenberg JS,Zhang F,Collins JJ

July 1, 2021

Nat Biomed Eng

Danko D,Bezdan D,Afshin EE,Ahsanuddin S,Bhattacharya C,Butler DJ,Chng KR,Donnellan D,Hecht J,Jackson K,Kuchin K,Karasikov M,Lyons A,Mak L,Meleshko D,Mustafa H,Mutai B,Neches RY,Ng A,Nikolayeva O,Nikolayeva T,Png E,Ryon KA,Sanchez JL,Shaaban H,Sierra MA,Thomas D,Young B,Abudayyeh OO,Alicea J,Bhattacharyya M,Blekhman R,Castro-Nallar E,Cañas AM,Chatziefthimiou AD,Crawford RW,De Filippis F,Deng Y,Desnues C,Dias-Neto E,Dybwad M,Elhaik E,Ercolini D,Frolova A,Gankin D,Gootenberg JS,Graf AB,Green DC,Hajirasouliha I,Hastings JJA,Hernandez M,Iraola G,Jang S,Kahles A,Kelly FJ,Knights K,Kyrpides NC,Łabaj PP,Lee PKH,Leung MHY,Ljungdahl PO,Mason-Buck G,McGrath K,Meydan C,Mongodin EF,Moraes MO,Nagarajan N,Nieto-Caballero M,Noushmehr H,Oliveira M,Ossowski S,Osuolale OO,Özcan O,Paez-Espino D,Rascovan N,Richard H,Rätsch G,Schriml LM,Semmler T,Sezerman OU,Shi L,Shi T,Siam R,Song LH,Suzuki H,Court DS,Tighe SW,Tong X,Udekwu KI,Ugalde JA,Valentine B,Vassilev DI,Vayndorf EM,Velavan TP,Wu J,Zambrano MM,Zhu J,Zhu S,Mason CE,International MetaSUB Consortium

June 24, 2021

Cell

Abudayyeh OO,Gootenberg JS

May 28, 2021

Science

Schermer B,Fabretti F,Damagnez M,Di Cristanziano V,Heger E,Arjune S,Tanner NA,Imhof T,Koch M,Ladha A,Joung J,Gootenberg JS,Abudayyeh OO,Burst V,Zhang F,Klein F,Benzing T,Müller RU

November 2, 2020

PLoS One

Joung J,Ladha A,Saito M,Kim NG,Woolley AE,Segel M,Barretto RP,Ranu A,Macrae RK,Faure G, Ioannidi EI, Krajeski Rn, Bruneau R, Huang M, Yu XG, Li JZ, Walker BD, Hung DT, Greninger AL, Jerome KR, Gootenberg JS, Abudayyeh OO, Zhang F.

October 8, 2020

N. Engl. J. Med.

Zetsche B,Abudayyeh OO,Gootenberg JS,Scott DA,Zhang F

September 25, 2020

Keio J. Med.

Patchsung M,Jantarug K,Pattama A,Aphicho K,Suraritdechachai S,Meesawat P,Sappakhaw K,Leelahakorn N,Ruenkam T,Wongsatit T,Athipanyasilp N,Eiamthong B,Lakkanasirorat B,Phoodokmai T,Niljianskul N,Pakotiprapha D,Chanarat S,Homchan A,Tinikul R,Kamutira P,Phiwkaow K,Soithongcharoen S,Kantiwiriyawanitch C,Pongsupasa V,Trisrivirat D,Jaroensuk J,Wongnate T,Maenpuen S,Chaiyen P,Kamnerdnakta S,Swangsri J,Chuthapisith S,Sirivatanauksorn Y,Chaimayo C,Sutthent R,Kantakamalakul W,Joung J,Ladha A,Jin X,Gootenberg JS,Abudayyeh OO,Zhang F,Horthongkham N,Uttamapinant C

August 26, 2020

Nat Biomed Eng

Baerwald MR,Goodbla AM,Nagarajan RP,Gootenberg JS,Abudayyeh OO,Zhang F,Schreier AD

July 1, 2020

Mol. Ecol. Resour.

Ladha A,Joung J,Abudayyeh OO,Gootenberg JS,Zhang F

May 8, 2020

medRxiv

Zhang F,Abudayyeh OO,Gootenberg JS

February 1, 2020

White paper

Freije CA,Myhrvold C,Boehm CK,Lin AE,Welch NL,Carter A,Metsky HC,Luo CY,Abudayyeh OO,Gootenberg JS,Yozwiak NL,Zhang F,Sabeti PC

December 5, 2019

Mol. Cell

Kellner MJ,Koob JG,Gootenberg JS,Abudayyeh OO,Zhang F

September 23, 2019

Nat. Protoc.

Abudayyeh OO,Gootenberg JS,Franklin B,Koob J,Kellner MJ,Ladha A,Joung J,Kirchgatterer P,Cox DBT,Zhang F

July 11, 2019

Science

Abudayyeh OO,Gootenberg JS,Kellner MJ,Zhang F

June 1, 2019

CRISPR J

Hirano S,Abudayyeh OO,Gootenberg JS,Horii T,Ishitani R,Hatada I,Zhang F,Nishimasu H,Nureki O

April 29, 2019

Nat. Commun.

Abudayyeh OO,Gootenberg JS

April 1, 2019

CRISPR J

Slaymaker IM,Mesa P,Kellner MJ,Kannan S,Brignole E,Koob J,Feliciano PR,Stella S,Abudayyeh OO,Gootenberg JS,Strecker J,Montoya G,Zhang F

March 26, 2019

Cell Rep.

Nishimasu H,Shi X,Ishiguro S,Gao L,Hirano S,Okazaki S,Noda T,Abudayyeh OO,Gootenberg JS,Mori H,Oura S,Holmes B,Tanaka M,Seki M,Hirano H,Aburatani H,Ishitani R,Ikawa M,Yachie N,Zhang F,Nureki O

September 21, 2018

Science

Tycko J,Barrera LA,Huston NC,Friedland AE,Wu X,Gootenberg JS,Abudayyeh OO,Myer VE,Wilson CJ,Hsu PD

July 27, 2018

Nat. Commun.

Myhrvold C,Freije CA,Gootenberg JS,Abudayyeh OO,Metsky HC,Durbin AF,Kellner MJ,Tan AL,Paul LM,Parham LA,Garcia KF,Barnes KG,Chak B,Mondini A,Nogueira ML,Isern S,Michael SF,Lorenzana I,Yozwiak NL,MacInnis BL,Bosch I,Gehrke L,Zhang F,Sabeti PC

April 27, 2018

Science

Gootenberg JS,Abudayyeh OO,Kellner MJ,Joung J,Collins JJ,Zhang F

April 27, 2018

Science

Cox DBT,Gootenberg JS,Abudayyeh OO,Franklin B,Kellner MJ,Joung J,Zhang F

November 24, 2017

Science

Abudayyeh OO,Gootenberg JS,Essletzbichler P,Han S,Joung J,Belanto JJ,Verdine V,Cox DB,Kellner MJ,Regev A,Lander ES,Voytas DF,Ting AY,Zhang F

October 4, 2017

Nature

Kim JW,Abudayyeh OO,Yeerna H,Yeang CH,Stewart M,Jenkins RW,Kitajima S,Konieczkowski DJ,Medetgul-Ernar K,Cavazos T,Mah C,Ting S,Van Allen EM,Cohen O,Mcdermott J,Damato E,Aguirre AJ,Liang J,Liberzon A,Alexe G,Doench J,Ghandi M,Vazquez F,Weir BA,Tsherniak A,Subramanian A,Meneses-Cime K,Park J,Clemons P,Garraway LA,Thomas D,Boehm JS,Barbie DA,Hahn WC,Mesirov JP,Tamayo P

August 23, 2017

Cell Systems

Joung J,Engreitz JM,Konermann S,Abudayyeh OO,Verdine VK,Aguet F,Gootenberg JS,Sanjana NE,Wright JB,Fulco CP,Tseng YY,Yoon CH,Boehm JS,Lander ES,Zhang F

August 17, 2017

Nature

Gootenberg JS,Abudayyeh OO,Lee JW,Essletzbichler P,Dy AJ,Joung J,Verdine V,Donghia N,Daringer NM,Freije CA,Myhrvold C,Bhattacharyya RP,Livny J,Regev A,Koonin EV,Hung DT,Sabeti PC,Collins JJ,Zhang F

April 13, 2017

Science

Joung J,Konermann S,Gootenberg JS,Abudayyeh OO,Platt RJ,Brigham MD,Sanjana NE,Zhang F

April 1, 2017

Nat. Protoc.

Yamada M,Watanabe Y,Gootenberg JS,Hirano H,Ran FA,Nakane T,Ishitani R,Zhang F,Nishimasu H,Nureki O

March 16, 2017

Mol. Cell

Shmakov S,Smargon A,Scott D,Cox D,Pyzocha N,Yan W,Abudayyeh OO,Gootenberg JS,Makarova KS,Wolf YI,Severinov K,Zhang F,Koonin EV

March 1, 2017

Nat. Rev. Microbiol.

Smargon AA,Cox DB,Pyzocha NK,Zheng K,Slaymaker IM,Gootenberg JS,Abudayyeh OA,Essletzbichler P,Shmakov S,Makarova KS,Koonin EV,Zhang F

February 16, 2017

Mol. Cell

Zetsche B,Heidenreich M,Mohanraju P,et al.

December 5, 2016

Nature

Abudayyeh OO,Gootenberg JS,Konermann S,Joung J,Slaymaker IM,Cox DB,Shmakov S,Makarova KS,Semenova E,Minakhin L,Severinov K,Regev A,Lander ES,Koonin EV,Zhang F

August 5, 2016

Science

Kim JW,Botvinnik OB,Abudayyeh O,Birger C,Rosenbluh J,Shrestha Y,Abazeed ME,Hammerman PS,DiCara D,Konieczkowski DJ,Johannessen CM,Liberzon A,Alizad-Rahvar AR,Alexe G,Aguirre A,Ghandi M,Greulich H,Vazquez F,Weir BA,Van Allen EM,Tsherniak A,Shao DD,Zack TI,Noble M,Getz G,Beroukhim R,Garraway LA,Ardakani M,Romualdi C,Sales G,Barbie DA,Boehm JS,Hahn WC,Mesirov JP,Tamayo P

May 1, 2016

Nat. Biotechnol.

Hirano H,Gootenberg JS,Horii T,Abudayyeh OO,Kimura M,Hsu PD,Nakane T,Ishitani R,Hatada I,Zhang F,Nishimasu H,Nureki O

February 25, 2016

Cell

Shmakov S,Abudayyeh OO,Makarova KS,Wolf YI,Gootenberg JS,Semenova E,Minakhin L,Joung J,Konermann S,Severinov K,Zhang F,Koonin EV

November 5, 2015

Mol. Cell

Dahlman JE,Abudayyeh OO,Joung J,Gootenberg JS,Zhang F,Konermann S

November 1, 2015

Nat. Biotechnol.

Zetsche B,Gootenberg JS,Abudayyeh OO,Slaymaker IM,Makarova KS,Essletzbichler P,Volz SE,Joung J,van der Oost J,Regev A,Koonin EV,Zhang F

October 22, 2015

Cell

Ran FA,Cong L,Yan WX,Scott DA,Gootenberg JS,Kriz AJ,Zetsche B,Shalem O,Wu X,Makarova KS,Koonin EV,Sharp PA,Zhang F

April 9, 2015

Nature

Konermann S,Brigham MD,Trevino AE,Joung J,Abudayyeh OO,Barcena C,Hsu PD,Habib N,Gootenberg JS,Nishimasu H,Nureki O,Zhang F

January 29, 2015

Nature

Konieczkowski DJ,Johannessen CM,Abudayyeh O,Kim JW,Cooper ZA,Piris A,Frederick DT,Barzily-Rokni M,Straussman R,Haq R,Fisher DE,Mesirov JP,Hahn WC,Flaherty KT,Wargo JA,Tamayo P,Garraway LA

July 1, 2014

Cancer Discov.

Ran FA,Hsu PD,Lin CY,Gootenberg JS,Konermann S,Trevino AE,Scott DA,Inoue A,Matoba S,Zhang Y,Zhang F

September 12, 2013

Cell

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